rs31730743 SNP Detail

Summary

• ID
  rs31730743
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:100140048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAGATGCTG GACCTACTGC GGAGAGCTGC AAACTGAACC
  ATTGGCTTTT TTTTTTTTTT TTTTGACAGT GTTAATACAA ATTCATGTGG TTTCAGCTCG
  S
  TCTGCTGGCC AGCCAGCTCT CGTCCCCTGT ACTGGGCTTA TAAGCACACC GGTGACCCAC
  GCCTAGCTAT GTATACAGGC ACTGGGAACT CTAACTTGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47082908	NES11612445	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	G	G	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31730743					SNP	C	C	C	C	G	G	G	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47082908	NES11612445	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:100140048 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19484	CpG island 19484	1877 bp proximal
Gm72028	predicted gene, 72028	within coordinates
Rr652130	regulatory region 652130	1791 bp distal
Rr652131	regulatory region 652131	1451 bp proximal
Rr652132	regulatory region 652132	1578 bp proximal