rs31735794 SNP Detail

Summary

• ID
  rs31735794
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:89816265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTA ATTTTATTGC ATTCTGAGTA
  Y
  TGATCATCTT AGCACAAGAA CTAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46063695	mCV22591639	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145293439	ENSMUSSNP13506	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss322314351	CHEV_7_97315567	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31735794					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:89816265 () rs orientation: forward

Symbol	Name	Function Class
Picalm	phosphatidylinositol binding clathrin assembly protein	within coordinates
Tssr67723	transcription start site region 67723	1509 bp downstream
Tssr67724	transcription start site region 67724	991 bp downstream
Tssr67725	transcription start site region 67725	949 bp downstream
Tssr67726	transcription start site region 67726	934 bp downstream
Tssr67727	transcription start site region 67727	870 bp downstream
Tssr67728	transcription start site region 67728	1244 bp upstream
Tssr67729	transcription start site region 67729	1393 bp upstream