rs31737834 SNP Detail

Summary

• ID
  rs31737834
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126270217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCCTAGTT CTCTACCCAC
  CCCTCCTACT GCCCTTAGTC ACTTGGCCAG AGCTGCTCAT CTCTTTCCTT CCTGTACTGT
  TCTCTATGGT ATGCTTTGGT GACAGTCTGT CACCCTCTAT ATTCCCAGGC CAGCTACACA
  TTGGAAACTT GCTTAGCCCC CAGCCTTCCA GGTTTCCTCA GGTTCTGTTG CCTTGGCTTC
  M
  TGACCTCCGC CTTACCACAG AGGCAACTCT TTACCCTTAC TGTGACCGTG GTAGCAATTT
  TTGTTTGTTT TCAGTTGAAG AGGGTGATGA GCTGAATGTG AGGAGACCTA GGATCCACAC
  TAGATAATCT GTGCAGCTTT TGCTAAAATT ACATGCACTG GTAGAAAGGA GATAAAGATG
  GGTATACATT TCAGGAATTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46063428	mCV23683633	ABI	CRAMUS_MOUSE	f	SNP		A	C					A		A
ss47256206	NES11552151	PERLEGEN	MM_PANEL2	f	SNP	A		C	A	A	A	A		A	A	A	A	A	A	A	C	A
ss145875587	ENSMUSSNP6035516	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C							A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31737834					SNP	A	A	C	A	A	A	A	A	A	A	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47256206	NES11552151	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126270217 () rs orientation: forward

Symbol	Name	Function Class
D930031A20Rik	RIKEN cDNA D930031A20 gene	1892 bp downstream
Sgf29	SAGA complex associated factor 29	within coordinates
Sult1a1	sulfotransferase family 1A, phenol-preferring, member 1	1820 bp downstream