rs31738726 SNP Detail

Summary

• ID
  rs31738726
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36727693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTAGCAC GTCTCCTGGT
  TAAAATTTGG CCCCTATACC CATCAAAGAA TAACTCTAAA TGGCCGTTTA CTGGAACTTT
  AATAGCAAAC TTTTACAACT CTCTAGCTAG CGATCTGTAG ACCATTCCCT ACCCCACGTT
  TTCTTGCTGC TTGCTCTCCA CTCCCGGTTC CCTGCTCCCC TGATTCTGCC GCCACCACGT
  R
  CTTTCCATCC GCCCCTCACT CTCTGTTCAG GGCGGTGCTG CCTGACAATC CTGAGCTCTC
  CACATTCCCC CTTGCTGTCT CCCTCCCTGT TTGACCTGAC TCCACAGCAG CCAGTTGACT
  AGAGCTCTGG CAGCAAGGAC ACAGCTGCAG CTACGGCCCC CCAGCCCCGC CTACTCAACC
  CTGCCACCCA GTGCTCTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss39321074	mCV23782641	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss147608210	ENSMUSSNP615671	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31738726					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36727693 () rs orientation: forward

Symbol	Name	Function Class
A830021M18Rik	RIKEN cDNA A830021M18 gene	within coordinates
Cpgi7034	CpG island 7034	within coordinates
Gm41297	predicted gene, 41297	within coordinates
Tssr131079	transcription start site region 131079	1124 bp downstream
Tssr131080	transcription start site region 131080	1070 bp downstream
Tssr131081	transcription start site region 131081	1048 bp downstream
Tssr131082	transcription start site region 131082	753 bp downstream
Tssr131083	transcription start site region 131083	577 bp downstream
Tssr131084	transcription start site region 131084	508 bp downstream