rs31739851 SNP Detail

Summary

• ID
  rs31739851
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129875004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGG CATGTCATTG TTATACTATT
  Y
  GACCATTTTA ATTAATTAAT TAAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45565739	mCV22732252	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss135891555	ENSMUSSNP5225015	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss320964162	CHEV_3_129784273	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31739851					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129875004 () rs orientation: forward

Symbol	Name	Function Class
Gm42663	predicted gene 42663	226 bp downstream
Rr585128	regulatory region 585128	1243 bp distal
Rr585129	regulatory region 585129	1343 bp distal