rs31747379 SNP Detail

Summary

• ID
  rs31747379
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:48608620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCAACACT TATGAAATTC
  TGAACTGGCA ACAGATGCCA CTGATTTCTG CCTGAATAGT TACATCTGAC CCTCCTAAGC
  ATGGATGGGT CATATTTTTC TTGGTTCATT AAATATAAAG CCATTTTACT TATCCATTTC
  AGAATCATTT ATACATTTAC TAATAATCCA TTCAAAATAT GCCAGTTCTA CTAATTGCTG
  R
  GATGACCATG GAAATAACAC ATTCCAGCTT GCTATCCATT GCAGAACTGT TTAGTGCAGT
  GTTCTGGTAC CATCGTTTGT TTGAACCTAA GAAAATAATT CATGGTATTT TTTGAGTGAT
  GTGCCAAGTT ATTTTTATAT TAATCATAGA ATCATTGCTA TATTACCTAC TTTTGTGAAA
  AATCCATGTC TTTCATTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47085060	NES11246320	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs31747379					SNP	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47085060	NES11246320	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:48608620 () rs orientation: forward

Symbol	Name	Function Class
Gm1818	predicted gene 1818	1952 bp upstream
Gm59684	predicted gene, 59684	1857 bp downstream
Rr465734	regulatory region 465734	1844 bp distal