rs31749350 SNP Detail

Summary

• ID
  rs31749350
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:19294581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTTAGCCT CTAAGCGCTG GGCTCACAGC TGCAGACAGC
  CACACCAGGT TTCTTAACCA CTTCTGAATG GCCGCTCTGC TCCCCCCACC CCTTCCTGCT
  K
  CGATCTTGCC ACAGTGGACA ACAGGCTGCC GCCAGGGCCC AGTGGACTCT TCCTGTCCTC
  AGCACCAGTT CCAAGAAGTT CAGAACCCAA AACAAACCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46064444	mCV25052341	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss148478824	ENSMUSSNP1723382	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss322117452	CHEV_7_20146005	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31749350					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19294581 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ppp1r37	protein phosphatase 1, regulatory subunit 37			Intron
				Noncoding-Transcript-Variant
Rr643186	regulatory region 643186			1832 bp distal
Rr643187	regulatory region 643187			1392 bp distal
Rr643188	regulatory region 643188			1830 bp proximal
Tssr70928	transcription start site region 70928			1466 bp downstream
Tssr70929	transcription start site region 70929			1512 bp downstream
Tssr70930	transcription start site region 70930			1545 bp downstream
Tssr70931	transcription start site region 70931			1721 bp downstream
Tssr70932	transcription start site region 70932			1756 bp downstream