rs31751077 SNP Detail

Summary

• ID
  rs31751077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84009973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAACATGAT CAGCCTCTGT
  GACTTAGTGA CACCCTGTCT CAAAACAAAA AGGACAAAGA GAACCCAGGC TGTAGCTCAG
  TGCAGGAATG ACTGCCTAGC ATGAGCACTG TGGGGTGCAA GGTGGAGGAG GGGGAGAAAG
  TGAGGAAAGG AAAGAAAGTG GGGGACAGGA GATGCTGGTG GTGATGTCAT AAAGAACAGA
  Y
  TCAAATGACT AAGGAGCTGG GAGAAGTATC AGTGAGTGCA GCCCAGGAGG GTTCCACTCA
  GGTCTGCTTA ACACCTCAAG TGGACCCTCA GAGATTAGAA ACATCCTAGA TAAAAATATG
  GTTACATCAC CTAGCCGGCC AAATCTTGCA GACTATGGTA TCTTTGTGGC CTATCTAATG
  GAGGCGTGGA GGAGGCGTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss48084117	NES12077422	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs31751077					SNP	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48084117	NES12077422	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84009973 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	1506 bp upstream
Rr304808	regulatory region 304808	1373 bp distal
Rr304809	regulatory region 304809	1228 bp proximal
Rr310901	regulatory region 310901	1293 bp distal
Rr310902	regulatory region 310902	583 bp proximal
Tssr132442	transcription start site region 132442	1528 bp upstream
Tssr132443	transcription start site region 132443	1551 bp upstream
Tssr132444	transcription start site region 132444	1585 bp upstream