rs31751082 SNP Detail

Summary

• ID
  rs31751082
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84010239 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGGCCTATC TAATGGAGGC GTGGAGGAGG CGTCAGAAAG
  GACACCATTG CGACAGTCAG AGTGTACTGT CCAAGCTGCG ATCACATCAC AGGGCTGTGC
  Y
  GATGGCTGAT GTATGGATGC ATCCTGAATG CTCTAATGTG GGTATATAAG GAGCGCTTCT
  CCGCTGGGCA AGGTGGGGCG CTCCTGTCAT CCTGGCACTT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48084123	NES12077425	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31751082					SNP	C	C	C	C	T	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48084123	NES12077425	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84010239 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	1240 bp upstream
Rr304808	regulatory region 304808	1639 bp distal
Rr304809	regulatory region 304809	962 bp proximal
Rr310901	regulatory region 310901	1559 bp distal
Rr310902	regulatory region 310902	317 bp proximal
Tssr132442	transcription start site region 132442	1262 bp upstream
Tssr132443	transcription start site region 132443	1285 bp upstream
Tssr132444	transcription start site region 132444	1319 bp upstream