rs31751301 SNP Detail

Summary

• ID
  rs31751301
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:167627705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTCTGTG ACCTCTAGAC
  TCAGCACACA TTGGATCTGC CTGTCCTTAT AAATACATAA GAATATATAG ATTAATTTTT
  AATCTGTTAG CAGTATGATA TTTTTGGTAT TTCTATATTA GATCATAGTT ACAACTCCAT
  GTTTAGAGCA GAATGGACAA GACCCATGAG ATTAAAACTT TATGAATCAC AAGTTTTACA
  K
  AAAATGAACT TGTCATTATT CTTGACTGTT AAATGCCTCC TTGATATTTT TTAACTTAAC
  ACTGGTAAGT CCTCCTCCCA CACTTCTGTG TCCCTACCCC CACACTTGTC CTTCTGCTCT
  TTCTCTTTTC TACCTCCTAT CTCCTGTTCC TACTCCTCCT CCTCTTCTCA TTCTTTCTCC
  CCTTCCCTTC TTTTCTTCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47085307	NES11020301	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs31751301					SNP	T	T	T	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47085307	NES11020301	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:167627705 () rs orientation: forward

Symbol	Name	Function Class
Arhgap6	Rho GTPase activating protein 6	within coordinates
Rr9578	regulatory region 9578	297 bp proximal