rs31752016 SNP Detail

Summary

• ID
  rs31752016
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19116039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATGCGCA CGCGCCAATT
  TTCCGATTGG CAGAGTGACG GGAGGACTCG GCCAATGGCG TCCCGAGGAA GGTGTGTCTC
  TGGGTCACGC CCCCTCGTTG AATATTCAGG AGCGGGCGTG TGGACGCCGC GATCAGCCGC
  CATGAAGTGA GATGGGGTCT CTGAAAGAGC GGGCGGCTCT GCGGTGGGCA ATGGGGCGGC
  S
  GGTGGGCGTC GCCGGGGCTG GGGCGCGGCG TGGAGAGGCT GCGGAGACCG GTCCGGGTGG
  CTTCGGGGTC CCTGGCGGCG AGACGCCACG AGGGCGGGCG GGCGGGCGGA GCGGAGGCCG
  AGGCGGCTCG AGAGCACCGG GCACCGACGC CTCACCGCCG CCAGGCTCAA CGTGGACGGG
  CTGCTGGTCT ACTTCCCGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46064807	mCV24423666	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs31752016					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19116039 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18481	CpG island 18481	within coordinates
Ercc2	excision repair cross-complementing rodent repair deficiency, complementation group 2	within coordinates
Gm26852	predicted gene, 26852	106 bp downstream
Rr400148	regulatory region 400148	25 bp downstream
Tssr64844	transcription start site region 64844	62 bp downstream