rs31752199 SNP Detail

Summary

• ID
  rs31752199
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102337394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCATA CATTCTCTGC CTTAAAGTCA
  M
  CCAAGTTCAA GGGAATTGAA ATCAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46064743	mCV24696617	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
ss145571468	ENSMUSSNP6970524	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322357796	CHEV_7_109836701	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31752199					SNP	C	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102337394 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	675 bp distal
Gm45527	predicted gene 45527	1968 bp upstream
Rr652623	regulatory region 652623	928 bp distal
Rr652624	regulatory region 652624	370 bp distal
Trim68	tripartite motif-containing 68	860 bp upstream
Tssr73953	transcription start site region 73953	889 bp upstream