rs31752972 SNP Detail

Summary

• ID
  rs31752972
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:114829607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTT GCTTTCCTAA TCAATTAAAA
  M
  ATTTTAAAGT AAAAAAAGCC AGGTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45567696	mCV23199579	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	A
ss147272127	ENSMUSSNP1619631	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
ss321275139	CHEV_4_114645015	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31752972					SNP	C	C	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114829607 () rs orientation: forward

Symbol	Name	Function Class
Cmpk1	cytidine/uridine monophosphate kinase 1	within coordinates
Rr597684	regulatory region 597684	1409 bp distal
Tssr42821	transcription start site region 42821	1894 bp upstream