rs31754973 SNP Detail

Summary

• ID
  rs31754973
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148416982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT AAGAGGCTGG GAGAGGAAGA
  R
  TCAAGGTGGT CAAGAAAAGA CAGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss45567831	mCV24213676	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss321419279	CHEV_4_147706634	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs31754973					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148416982 () rs orientation: forward

Symbol	Name	Function Class
Gm68587	predicted gene, 68587	925 bp upstream
Tssr40269	transcription start site region 40269	214 bp downstream
Tssr40270	transcription start site region 40270	954 bp upstream