rs31755023 SNP Detail

Summary

• ID
  rs31755023
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:123047555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGGGGTT TCTTTCTGTT
  CCTGGGAGAT GAATGCGGTG AAGGCCATGC ATGACTAACG TTGTAAACAG ATAAATATTC
  ATTAGGTTCC TTGAAGATGC TGCTGGGGAA TGCAATTAAG TCCCAGCACG TGTCCTGGGA
  AGCAGTGTGT ACCATTGTTT ACCTGAATAA GTGAGCCCTT GACCCAGTGC CTGAAATGTC
  R
  GCCTGGTTCC TGTCAAGGGC TTACCAGGGA AGCATAGGGA AGCCCAGGCC AAAGGCACCA
  AATTTCAGAC CTGGAAGAAG CCAGCTGCTC CCTCCCACCA TCCCTCAGAT GGGTACCAAG
  GTTGTAAAGT GTGGGATCCC ACCCACCATG CAGACTCCAG ACTCTCTGAG CCTCAGCTTC
  CCAAGTATGC CTGGAGGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47586343	NES11160484	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31755023					SNP	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586343	NES11160484	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123047555 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr366733	regulatory region 366733			1080 bp downstream
Rr366734	regulatory region 366734			973 bp upstream
Zfpm1	zinc finger protein, multitype 1			Intron
				Noncoding-Transcript-Variant