rs31755919 SNP Detail

Summary

• ID
  rs31755919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68259621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTGCTCAA TGTTACAGAA
  GAAGAGAAGA TTAGTAGAAT ATAAGTACAA AATATGTCAC TTTGGCATAG CAGTGATTTC
  AAGAGAAGAT GATTGGTTTA AAGTAGATTA AAAAGAAAGC TCTCTGACAC TTCTTAGATA
  AATCAAAGCA CTAGCATCTT TCCCAACTGC ATAATAAACA TGGAAGTCAT GTTTCCCATA
  Y
  GTTCTTGAAG AATGCCAAAG GTTAATCTCT AGGATTGAGT TTAGACCTTT ATCCATCCAC
  AGGTGACAAC AGTGAGACTG TCATCCAGTT CTGTGCCCCT TCCAAATTCT TGTCTTCAAT
  GTTCAACATA CATGTAGTGG CTATTCCTGG CTGTCAACTT GACTATATTT GGAATGAACT
  GCAATCCAGA ATTGGAAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45567649	mCV24164772	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss146487511	ENSMUSSNP2654114	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31755919					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68259621 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	within coordinates
Rr376644	regulatory region 376644	1651 bp upstream