rs31756708 SNP Detail

Summary

• ID
  rs31756708
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:123048304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCAGTGGC AACCCATCCC
  TAAACCCTGG GCTTTCCTCC GTGTGCTGTC CGTCTCGGGG TCCTTGGTGA AAGAACAGCT
  CCTCCAAACC CCACTTTTCC TGTGCTGTTT TACCCGCTAG GAGCGCATCT GCTGGGTACT
  AGCCTTCTCT CCGCTGCAAG GGGTTGGGGC AGGAACTAGG TTATCTATGT AACTGACTGT
  K
  GACTGTCACC AGAGCTGCGG GCACAATTGC AGAGGTCACC TTGAACAAGG TGCTGGGGTG
  AGCCGAGGTT GAGATCAGCT GCCCTCCCCT TACCAATCTG TCCCTCTAAC TGGCTGACCT
  GGGCCCTGAA CCAGAGAGGC ATGTTACCAT AGTGATTGTT GTACACTGCC ACCTATCCCA
  GACGTCCCCC AGTCCCTGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47586358	NES11160496	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T		G	T	T	G		T
ss322850588	CHEV_8_124845465	CHEVERUD	SCREENING_POP	f	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31756708					SNP	T	T	T	T	T	T	T	T	T	T	G	G	T	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586358	NES11160496	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123048304 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm63990	predicted gene, 63990			1818 bp downstream
Rr366733	regulatory region 366733			1829 bp downstream
Rr366734	regulatory region 366734			224 bp upstream
Zfpm1	zinc finger protein, multitype 1			Intron
				Noncoding-Transcript-Variant