rs31757684 SNP Detail

Summary

• ID
  rs31757684
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:123048368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTGAAAGA ACAGCTCCTC
  CAAACCCCAC TTTTCCTGTG CTGTTTTACC CGCTAGGAGC GCATCTGCTG GGTACTAGCC
  TTCTCTCCGC TGCAAGGGGT TGGGGCAGGA ACTAGGTTAT CTATGTAACT GACTGTTGAC
  TGTCACCAGA GCTGCGGGCA CAATTGCAGA GGTCACCTTG AACAAGGTGC TGGGGTGAGC
  Y
  GAGGTTGAGA TCAGCTGCCC TCCCCTTACC AATCTGTCCC TCTAACTGGC TGACCTGGGC
  CCTGAACCAG AGAGGCATGT TACCATAGTG ATTGTTGTAC ACTGCCACCT ATCCCAGACG
  TCCCCCAGTC CCTGAGTGCA GAGTGTGCTG CTTCCCCCCT GGGAGAGGGA CCACAGCCCT
  TATCAGCAAC CAGCCCTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47586364	NES11160499	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C		T	C	C		C
ss322850589	CHEV_8_124845529	CHEVERUD	SCREENING_POP	f	SNP										T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs31757684					SNP	C	C	C	C	C	C	C	C	C	T	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586364	NES11160499	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123048368 () rs orientation: forward

Symbol	Name	Function Class
Gm63990	predicted gene, 63990	1754 bp downstream
Rr366733	regulatory region 366733	1893 bp downstream
Rr366734	regulatory region 366734	160 bp upstream
Zfpm1	zinc finger protein, multitype 1	within coordinates