rs31759028 SNP Detail

Summary

• ID
  rs31759028
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:55571131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTTCTTTC TGTGCTGTAA TTGTCTCATA AAGTAAGTAA
  ACATCAGGAG AACCCTGTAT TCTGCAGCAG GTCACCTGTG TCCGCTCTCA TATTTAGAAC
  Y
  GTCTTCTTTC TCAATCATTT CCTATTCCTA TTCCCGAGAG ATATCCTCTC AATAGGCCGT
  GATGATGGCT TAATGGGATG TTTTTACCTT CTTTACTGAA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	NOD/ShiLtJ	NZW/LacJ
ss49771885	NES12385208	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	NOD/ShiLtJ	NZW/LacJ
rs31759028					SNP	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49771885	NES12385208	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:55571131 () rs orientation: forward

Symbol	Name	Function Class
Gm10477	predicted gene 10477	339 bp downstream
Gm62070	predicted gene, 62070	32 bp downstream