rs31761191 SNP Detail

Summary

• ID
  rs31761191
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78637644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAT TGTTATCTCA GTTCAAATTG
  Y
  GGAGTATCTG AATGAGATAG GTAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45068007	mCV22631622	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss144751926	ENSMUSSNP1468753	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss319804040	CHEV_1_78656502	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31761191					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78637644 () rs orientation: forward

Symbol	Name	Function Class
Acsl3	acyl-CoA synthetase long-chain family member 3	within coordinates
Cpgi461	CpG island 461	1298 bp distal
Rr29694	regulatory region 29694	within coordinates
Rr396121	regulatory region 396121	1929 bp downstream
Tssr12428	transcription start site region 12428	1645 bp upstream
Tssr12429	transcription start site region 12429	1618 bp upstream
Utp14b	UTP14B small subunit processome component	within coordinates