rs31761891 SNP Detail

Summary

• ID
  rs31761891
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185245642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCACCAGC TCTGACCCAC
  ATTCTAGTAA CCAAATGGAT CTGCCACCCT TGTGGTTTGA TAATACAATT CCCAGTAACC
  CAGTACAAAC AAGACTCAAT GCTTATAATT AACCAATTGG ATTTATGTAT CAATAAAATC
  ACAATTTACA AGATGCTAAT ACAATAATTT CAGAGCCAAT TGATAACAAT AAAAGCTTTT
  Y
  CCCAGTTATT CTAACTTTGT GAAATCATCA CATCAGCCTC CATTCTCCTC GCTCTCCTCT
  GAGAGGCTCC TTGTCTGTGC AACAATTAGC TTTACCTACC CTTTCCCTGT CCAATCACAG
  GCAGGGACAG GGAAAATCCT ACAACATCTA TATATCTATT ATTTATTATC TATCTATCTA
  TCTATCTATC TATCTATCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45067715	mCV24006382	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss146434891	ENSMUSSNP7077874	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss320176769	CHEV_1_187337324	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31761891					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185245642 () rs orientation: forward

Symbol	Name	Function Class
Rr425406	regulatory region 425406	1494 bp proximal