rs31763489 SNP Detail

Summary

• ID
  rs31763489
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84011508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCACACTGGA GGGTGGGGGA GTGTGGGGAG GTGGGGGCGT
  GGGGGGTGTG ACCTGAAAGC CCAGCCCTCT TCAAAGGGGA CTGTCACCCT TCTACCTACC
  Y
  GCCTGCCTAC CTACCTGCCT GCCTACATCA CTGACAGCCA GCAACAGGCT TTTCGAACAG
  AAGCAGAGGC TCAGAGCAAA GAACATCTCA ACCCTTGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39323849	mCV23046293	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss148246458	ENSMUSSNP4361892	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31763489					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84011508 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	within coordinates
Rr304809	regulatory region 304809	within coordinates
Rr304810	regulatory region 304810	1893 bp proximal
Rr310902	regulatory region 310902	20 bp distal
Tssr132442	transcription start site region 132442	within coordinates
Tssr132443	transcription start site region 132443	16 bp upstream
Tssr132444	transcription start site region 132444	50 bp upstream