rs31764434 SNP Detail

Summary

• ID
  rs31764434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:123044419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCCCAGA GAGCAATGGA
  ATGAAGATAA GGCAGGTGGG TGCACTGAGC TGGAGCCAGG TGAAGCCAAG CTCTGGGCAA
  GACCAGGTTG TCCGTGCCAT CATAAGTAGG CAGGGAGATG TGGGGGCTCT AAGCTGAGAG
  CTTAGAGCTC TGTCCCTATG CTAGGGGGAG GAAACCATGC CTCAGCCTCC TCAGGGATGC
  Y
  GGCTGCGTAG AAAAGAGCTC CTTGCCTTGG CATGGTACAC AATCCTCCAA GGGATTGGTG
  TGTCCTTTGA GGGGTGAGTG GGTGCACAGG TCACCGTTGC CATGGTTCCT CCTGCTAGTC
  TGGCTGCTTT GGTTGTGCCC TAAAGGGACA AAGGTGGTGT CTCCCTCCAA GAACCTAGAA
  TTCTGGCTCT GAACCATACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47586304	NES11160656	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C		T	C	C	T		C
ss322850566	CHEV_8_124841580	CHEVERUD	SCREENING_POP	f	SNP										T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31764434					SNP	C	C	C	C	C	C	C	C	C	T	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47586304	NES11160656	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123044419 () rs orientation: forward

Symbol	Name	Function Class
Rr366733	regulatory region 366733	1790 bp upstream
Rr672087	regulatory region 672087	1817 bp distal
Zfpm1	zinc finger protein, multitype 1	within coordinates