rs31767021 SNP Detail

Summary

• ID
  rs31767021
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128534188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGA TATAATCGTC TGAAACATTT
  S
  TGGTAAGAGA TGAATTACAT AGGAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45067582	mCV23203774	ABI	CRAMUS_MOUSE	f	SNP		G	G					C	G
ss60796462	NES16465428	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G		G	G	G		C	C	G	C		G
ss145462736	ENSMUSSNP3313027	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss319965301	CHEV_1_130503028	CHEVERUD	SCREENING_POP	f	SNP												G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31767021					SNP	G	G	G	G	G	G	G	C	G	G	G	G	C	C	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60796462	NES16465428	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128534188 () rs orientation: forward

Symbol	Name	Function Class
Rr366987	regulatory region 366987	392 bp downstream
Rr396265	regulatory region 396265	137 bp downstream
Rr417790	regulatory region 417790	142 bp distal
Rr417791	regulatory region 417791	1519 bp proximal
Tssr13482	transcription start site region 13482	1523 bp downstream