rs31768068 SNP Detail

Summary

• ID
  rs31768068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:37750778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCTCCTA GTGCTTGTGC
  TCCCACCATG GGTTTAATTC ACATACACTG GGATCCTGGA ACCCTATCTC CATTCTGCCT
  GAGATAGGAT CTCTTTCTGG CCACCTGACC ACAGGATTAT TTCACACACT GACTGATTGG
  TAAGTTTTCT CTTCCTGGTT AGTGTAAAAG CTTCTCTGGA GGCTACACTC TTCTACTGGC
  R
  TGGTTCCTTT TTCTCTCTCT CAGAAAACGT GGCACCAGGT GTAGAGTGTC TGCTCAGCCA
  TCTGCCCTGG TCCCTATTTC AGTCTTGGGA TCAGCTGGCT GTACAGCTTG TACCCATTTG
  TTCTAGTCCC ATCTGTGCCC TTGGAATGCC TTGGGCTCAG GCTGGTGACA ATTCTCCTCC
  CACCCATCTG TGTACAATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49273957	NES12726589	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31768068					SNP	G	G	G	G	G	G	A	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49273957	NES12726589	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:37750778 () rs orientation: forward

Symbol	Name	Function Class
4930517L18Rik	RIKEN cDNA 4930517L18 gene	1166 bp upstream
Gm37388	predicted gene, 37388	within coordinates
Gm38666	predicted gene, 38666	within coordinates
Gm38667	predicted gene, 38667	within coordinates
Gm58529	predicted gene, 58529	within coordinates
Pcdha4b	protocadherin alpha 4B	within coordinates
Rr393555	regulatory region 393555	within coordinates
Tssr152982	transcription start site region 152982	1013 bp downstream