rs31771887 SNP Detail

Summary

• ID
  rs31771887
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:72540484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCCACTG CGGGTTTACT
  GTCTAGACAG GCTGTGCGGG CAAGCCCAGA GGCAGATCCG TTCGGTACAC AGTGTCCTGC
  AGATATCAGG AGTTGAGTGA TAATGTCCTG AAGGCTTCTG CAATGGTCAG TTCACGGTGG
  GTAACCCGAG GCCCCCTGTT TCAGCGTCAC GGCAGCTGGG CCCCCAGCCT AAGTCACACG
  R
  TGGTGCTAGG TGGCCTTTTG GAATCTGGAC CACACAGCTT TCCCCTGGAG CGTGTCGCTG
  CATTCTGAGC CGTGCCGCAG ATGTTAGAGC TACAGCTCCC CTCTTCTGCT TCAGGGCTGC
  ATTGTGTTCC CTAACACAAC AACAGGACTT CCTGAGACAT CAGGGGGTAC AGGATGACTC
  TTTGCCATGG ATGGGTTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39324534	mCV23954890	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss148102828	ENSMUSSNP3288775	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31771887					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:72540484 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7154	CpG island 7154	within coordinates
Trappc9	trafficking protein particle complex 9	within coordinates