rs31771945 SNP Detail

Summary

• ID
  rs31771945
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:149697289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGCTGGATC AAAAGCCTTT GTCTTTCAGC CTCAAGTTCT
  GTATCACAGG TGTGCCCTCT ATCACTGAAT TGTACTTAAC TTCAGATTAA AAGTCTAAAT
  R
  AAAGCAATAG CAAGGTAATA ATAACCCCTA GATATAACTA TCCCTTGTTC AATGGCAAAA
  GCATAAATAA TAAGCTTAGC TGGGTAGGAT CTTGCCCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45068230	mCV24644454	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss145699144	ENSMUSSNP2563879	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31771945					SNP	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:149697289 () rs orientation: forward

Symbol	Name	Function Class
Rr372218	regulatory region 372218	1142 bp upstream