rs31772448 SNP Detail

Summary

• ID
  rs31772448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:131159836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGC CTCAGATAGT CCAAAGAAGC
  Y
  CCAGATCCCC AGACCTGGGA TTAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45068178	mCV23359439	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss145477277	ENSMUSSNP2512456	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31772448					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:131159836 () rs orientation: forward

Symbol	Name	Function Class
Rassf5	Ras association (RalGDS/AF-6) domain family member 5	within coordinates
Rr28475	regulatory region 28475	164 bp proximal
Tssr13566	transcription start site region 13566	1561 bp downstream