rs31774307 SNP Detail

Summary

• ID
  rs31774307
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:35700465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACATATAA TAAATAAATC
  TTAAAAAAAA ACAAAACTCA ACCTTGACTG AGCTACCTCT ATAATTCAGT TAGTACAACA
  ATGTCTTGAA CTGTGAGGAT GTGAATAGAC ACTTAGCAGG CAGGCTTGGT AAGTAAATCT
  ACAGAGACCT GGGATGGTCA CCTCTTAACA GGGGAAAACT GAGACTCTAG TACACTGCTG
  Y
  GTCTGTTGAG CACGATGAGT GTCCTTTGTG CTTCCTTTTT GAATTCTTGC CTCATTGTTG
  ACAAAACTTG TCATTGATGG AACAGTTACA TTGTGTGGGA TGTTGTATAA CATCTGGTTT
  GGAGAAATTA AAGCATTAAA ATTTTGTTTT ACTGTACTCT ATAATATTCA ACTTTACACC
  TTGCTTCTTC ATTAAGTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss39324466	mCV23384088	ABI	CRAMUS_MOUSE	f	SNP	T		C	C
ss51633337	NES14588599	PERLEGEN	MM_PANEL2	f	SNP		T		C		C		T
ss324921784	CHEV_15_35630074	CHEVERUD	SCREENING_POP	f	SNP					T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs31774307					SNP	T	T	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51633337	NES14588599	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:35700465 () rs orientation: forward

Symbol	Name	Function Class
Rr647	regulatory region 647	1050 bp proximal
Rr309492	regulatory region 309492	906 bp proximal
Vps13b	vacuolar protein sorting 13B	within coordinates