rs31774510 SNP Detail

Summary

• ID
  rs31774510
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84587985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAAGCCAC AGTCAGACCT
  GCCTGCCTGC CTCCCTCTGC TCTGGGTGGC CACAAAATAG GAAGGCATGA AATAAATTTA
  CAGCCCCAGA CTCCTGTCTG CCCCCTGGTG TCCTTCTGGG ACCTCCCCCC ACCCACCCAA
  CCACCCAACT TCCCTGACTT CGCTTTCCTG TCAGTCGCAT TCCCAGGCTG GGGCCAAGGC
  Y
  GCTTGTTCTT AGGTCCAGTG TTGCTATGTC ATCTTTTTTT GTTTGTTTGT TTTTTTTGAG
  ACAGGGTTTC TCTGTATAGC CCTAGCTGTC CTGGAACTCA CTTTGTAGAC CAGGCTGGCC
  TTGAACTCAG AAATCCTCCT GCCTCTTCCT CCCAAGTGCT GGGATCAAAG GCGTGCGCTA
  CCATGCCTGG CTATTGCTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48087341	NES12084234	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T	C	T	C	C	C	T	C	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31774510					SNP	C	T	C	T	C	T	C	C	C	T	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48087341	NES12084234	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84587985 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	111 bp downstream
Rr304870	regulatory region 304870	1385 bp distal
Rr304871	regulatory region 304871	within coordinates
Rr314877	regulatory region 314877	1186 bp distal
Rr314878	regulatory region 314878	1580 bp proximal
Rr404546	regulatory region 404546	1443 bp downstream