rs31775148 SNP Detail

Summary

• ID
  rs31775148
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82985501 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTATAGGTAG CATTCAGTGT ATGGGGTCTG TTACTGCTTG
  AAGTTTCAGG TATCTACAGG GGCTCTTGGA ATGGGTCCCA TATAGTTATG AGGCATTATT
  Y
  TCTATTTGCT CCTGTTTAAC AGAAAGGGAA ACTGAAGATG GAGAGGTTTT AGGCAAGCCA
  AGGTCATACA GCCCACAAGT GTCAGGGTTC AAGCCGGCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39324477	mCV22803185	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss148234875	ENSMUSSNP5751189	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31775148					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82985501 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	809 bp distal
Gm17206	predicted gene 17206	772 bp downstream
Rr308146	regulatory region 308146	700 bp proximal
Rr312184	regulatory region 312184	300 bp distal
Rr404540	regulatory region 404540	980 bp downstream
Serhl	serine hydrolase-like	within coordinates
Tssr132408	transcription start site region 132408	1090 bp downstream
Tssr132409	transcription start site region 132409	997 bp downstream
Tssr132410	transcription start site region 132410	982 bp downstream