rs31775225 SNP Detail

Summary

• ID
  rs31775225
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152116460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGGTTTA TATGCCAGCC
  CGCTGCTCAC TGCCTCTCGG ATACCCAGGG TACCCCATGC TGCCAGAATT GGATGTTCTG
  GATGCAGACA CCCTGGCTGG AGTCTCTTAC CTGCCAGGGG TAGACTGGGC CTCTGGCACA
  GGTCCCAGAG GTACATCCCA GGAGCTGGTG GAGGCCGTGG GCCACAGCAT ACACAGCCTC
  R
  TACACATTGT AGGCAGCGCT CATGGAGAAG GCTCCAAGCT CGGGCATGTT CCATGTCGTG
  AAAGCGTGAC ACTCCCTGCA CAGCTGGTTA GTGCCGCACC AGGACCCCTC TGGGCAAGTT
  CTGGGAGCAC CCATCACTGC CTGGACATAG GACTCTTCAA ACTCCTTCAG GCCAGGGACT
  TGTCTCTGCT GGATGGCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45569653	mCV24972459	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss148079335	ENSMUSSNP1120528	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31775225					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152116460 () rs orientation: forward

Symbol	Name	Function Class
Rr377433	regulatory region 377433	within coordinates
Rr605719	regulatory region 605719	1686 bp distal
Tas1r1	taste receptor, type 1, member 1	Coding-Synonymous
Tssr44802	transcription start site region 44802	610 bp upstream
Tssr44803	transcription start site region 44803	1750 bp downstream