rs31778255 SNP Detail

Summary

• ID
  rs31778255
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:84092736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACGGGCAA TTAAAGCCTA GAAAGTCAAG GAATTGACTG
  AGAAAAGAAA GGGGGGCTTA AGGGTTTGAG ATTTTCTATG TACTGTTATT ATTTGTAGTA
  K
  TATTATTAAT GTGCTTATTG GGTTTTTGAG GTTCAGTGTG GAGTCATTTC AGAGTGCGTT
  CTCTGTTCTC CGGGTGTCTG CTAAGTCCTT AAGCAAAGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	AKR/J	BALB/cByJ	FVB/NJ	KK/HlJ	LG/J	SM/J
ss49774071	NES12390842	PERLEGEN	MM_PANEL2	f	SNP		G	G	T	T
ss134233992	ENSMUSSNP940368	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325902979	CHEV_X_82294469	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	AKR/J	BALB/cByJ	FVB/NJ	KK/HlJ	LG/J	SM/J
rs31778255					SNP	G	G	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49774071	NES12390842	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:84092736 () rs orientation: forward

Symbol	Name	Function Class
Dmd	dystrophin, muscular dystrophy	within coordinates
Rr692261	regulatory region 692261	707 bp distal
Rr692262	regulatory region 692262	97 bp distal
Tssr161429	transcription start site region 161429	823 bp downstream
Tssr161430	transcription start site region 161430	797 bp downstream