rs31781413 SNP Detail

Summary

• ID
  rs31781413
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82984340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTCACTG TGGGGCCACC
  GGGGCCTTGT CTAGCTCGTG GTAATCATGC GGGGATGCCC AGGTATTGAG CCTGTCAAAG
  CTTGTCCTCC AGAGACTTAC TTCTCTGCTA GCTCTGACAC CATCCCACCG TAGCAGCACA
  GCAATGTGCC AGGAGTTGAG CAGCCCTGAG ATCCTCCTGA AAGTCCCGGG CCGGCCGCAG
  R
  AAGGCGGGGC CTCGGTGGGC GGTGTCGCTT GAAGGGGCGG GGCTGGCGCT AAAACTGGGG
  CTAAGGAGAC GGAAGCCGGT GGGGACGGGA AGGACCTGGA GGGAAAGTCC TGAGCGGGAC
  GCAAGAGGCG GGGCGTGAGC TTCTGAGTCC TTCCAGTTCC TGTGACCTCC TCAGCGAGGA
  GTGACAGCCT CACCGACCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39325362	mCV22803382	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31781413					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82984340 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	within coordinates
Gm17206	predicted gene 17206	1933 bp downstream
Rr308146	regulatory region 308146	1861 bp proximal
Rr312184	regulatory region 312184	within coordinates
Rr404540	regulatory region 404540	within coordinates
Serhl	serine hydrolase-like	54 bp upstream
Tssr132408	transcription start site region 132408	62 bp upstream
Tssr132409	transcription start site region 132409	142 bp upstream
Tssr132410	transcription start site region 132410	167 bp upstream