rs31781795 SNP Detail

Summary

• ID
  rs31781795
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84586282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTAGCAGG AAAGATGGGT
  CAGTGAGCCC CCAATGGTAA TCCCTGGGCT ACAGAAGCGG ATGCAGACTG GATCATAGGA
  AGAGGCCAGA TAGGGTCACT TGGAAGGCTC CCCATCATTA GGGCTGCTAC CTGGGGTATA
  AAGCCCTAGT ACTGGGTGTC TTCCAGCTCA AACAAGTTAG AACTGGGGAA CTTCACACCT
  Y
  CCAGGACCTG TTTGGCTGTA GACACTTACC TGGCAACCAA CCCCTCCTGA TCCAGGGAGG
  CACTCTGACA GAGCTTGTTG TACTCAAGAG TGCCGCCTCA TGGAGACTAT TAGGCATTGC
  AGGGTCCTGC ATAGAAGCCT TTCTTCTACA TGGCCAATGG AATTTGGCTC TGTCCTCACT
  CTCTATTCTG CCAACGAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48087317	NES12084281	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31781795					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48087317	NES12084281	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84586282 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	within coordinates
Rr404546	regulatory region 404546	within coordinates
Rr507026	regulatory region 507026	1330 bp distal
Rr507027	regulatory region 507027	1477 bp distal
Rr507028	regulatory region 507028	within coordinates
Rr507029	regulatory region 507029	87 bp proximal