rs31783234 SNP Detail

Summary

• ID
  rs31783234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92703740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAGCCTAG AATCAGAAAG
  ACTCAGTATG TAAGCTGGTG GTCCTCCTCC ATCAGCCTCC AGAACCCAAG GATTAGAGGT
  CTACCAGTAC ACCCAGCTCC CTGTGGTCTT GTTTTCATAC TGTGGAGTGG GATCTAGTCA
  ATGAGTCAGC TTTGTAGGTT CGCGAGGACC CCTGGGGCTA GCAATACACA GAACTCAGAG
  Y
  GCTCTTTATA TGAGTGAGCA ATTATGAACA CTTTGGAAAT CTTTGCAAAT GCCTCCCCAT
  TTGAAATAAT TTGCTTTGAA AGAATTGTAG ACTCAGGAGA GAGCGCAAAT GTCCAAGATC
  CCATATAGCC TTCTGGAGCT GTTTCCAATG GCAAACACAT CTTACACATC TATACCCCAC
  CACCAAACCA GGACTGCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46604358	NES10410920	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31783234					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46604358	NES10410920	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92703740 () rs orientation: forward

Symbol	Name	Function Class
Fam47e	family with sequence similarity 47, member E	within coordinates
Tssr47317	transcription start site region 47317	811 bp downstream