rs31784857 SNP Detail

Summary

• ID
  rs31784857
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:172028996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGC TGGGTGGTGG GGGGAGGGGA
  R
  TTGAGATGTA GCTTTCAGAA TATGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45069636	mCV23615014	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss120007302	PARCsnp_1.17729	PARC_SEQ	INBRED	f	SNP			G	A
ss120010200	PARCsnp_1.07367	PARC_SEQ	INBRED	f	SNP			G	A
ss320123177	CHEV_1_174131560	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31784857					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:172028996 () rs orientation: forward

Symbol	Name	Function Class
Pea15a	proliferation and apoptosis adaptor protein 15A	within coordinates
Rr28998	regulatory region 28998	within coordinates
Tssr15161	transcription start site region 15161	927 bp upstream
Tssr15162	transcription start site region 15162	874 bp upstream
Tssr15163	transcription start site region 15163	840 bp upstream