rs31784895 SNP Detail

Summary

• ID
  rs31784895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:124351805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTCACTGG AGGAGAAATC
  CATGTGCCTG TACTGACAAG CTATACTACG GTCCAGGCTA GAAGTTCAGA GACTGCCATA
  GTGGTACTAG GATAGGACCA TGACACATTG TGTTCCCCTT TTACATAAGT TCTCCAATAA
  TAAACACTTT GGTCCTACTC ACCAGGTGTC TGTCATTGAA CTGCTTTGTG AGCAGCTAGA
  R
  ATATGATCTC ACAGCACTGA TAATACATCC ACCTTTATCC TAGATTATCA CAGGAGAAAC
  CCTGGTGAGT GGCTTGTGCT CAGACAGAGA GAAATGTTGG GTCCAGATTA GCTCAAAGTT
  AAGTCAGTCA AGCATGCCCA AAACGGGCTG GGTTCTTATA TTTAGCTTAC TGGATACTTT
  CCAATAACTT GTTTTATCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss48088186	NES11866347	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs31784895					SNP	G	G	G	A	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48088186	NES11866347	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:124351805 () rs orientation: forward

Symbol	Name	Function Class
1700060L04Rik	RIKEN cDNA 1700060L04 gene	41 bp downstream
Gm44006	predicted gene, 44006	28 bp downstream
Rr638368	regulatory region 638368	351 bp proximal
Rr638369	regulatory region 638369	1475 bp proximal