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rs31793304 SNP Detail
Summary
  • ID
    rs31793304
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr4:68258437 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CTACTGAGGT AAATCATATC
    ACCACTGAGA GTCTCCAGGT TCATATCTCT TTGATGACAT TAATGATCAA ATAGAGTAAA
    TGATGTGATT GAACTCTGTT TGAAAAATAA TATGAAAAAT CCACTATTAT CAAGAATGGC
    AAAAAAATAG AGTAGTGGAA CGTTGGCAGT TCTTCATTTA ATTTCTTGAA TAGATTCCAG
    R
    AAAATTCTCA TTATCTAATT TATACCTGTT CATAAATTCA TTTAAAAGCC AATGGCACAC
    TATCATAAGT TATTTGAAAA ATCAATCATG CCTTGGAATA AATGTTATAA AAAGAAAATA
    TAATTGAAGA AGTGATATGA TAAACCCATG GGAAAACCTA TAATAGAAAG ATATAATAAT
    CAATATACCA TGTAAAAAAA                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45572097 mCV24164831 ABI CRAMUS_MOUSE f SNP G G A A A
ss146487460 ENSMUSSNP1306185 ENSEMBL ENSEMBL_Sanger f SNP G A A
ss321154321 CHEV_4_68001234 CHEVERUD SCREENING_POP f SNP A G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs31793304 SNP G G A A A A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:68258437 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr376643 regulatory region 376643 870 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory