rs31794924 SNP Detail

Summary

• ID
  rs31794924
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75556748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCATAATC CCTGCCCTCC AAGTTTTCCT GAGGTGTCGC
  AGGAGCCTGG ATAGGATGTC TTTCTTTTCT CTTTTAGGAA TTGTTCAACT TCTTGAAGCC
  Y
  GAAGGTAGTG AAACTGAAAA TCTAACCCAA GCTCCTTGTA ATCTCTAATC CTTTAAGAAG
  GACTGTGGGA TTTGATCAAG AAGCCCGGCA ACAAGTAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C57BL/6J	FVB/NJ	NOD/ShiLtJ
ss45070682	mCV25148459	ABI	CRAMUS_MOUSE	f	SNP	C		T
ss51280786	NES14520326	PERLEGEN	MM_PANEL2	f	SNP		C		T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C57BL/6J	FVB/NJ	NOD/ShiLtJ
rs31794924					SNP	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51280786	NES14520326	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75556748 () rs orientation: forward

Symbol	Name	Function Class
Gm69448	predicted gene, 69448	within coordinates
Rr413480	regulatory region 413480	1927 bp proximal