rs31796721 SNP Detail

Summary

• ID
  rs31796721
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136936217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACAGCCTC AAACCTCAAG AGGCTTAGTC
  CAtaattatt tatatttacc ttattttatt ttatattcat ttaaacattt ttttcatttg
  tttatttatt gtgcacatgg cacatgtgtg gaggtcagag gaaaattcac tatggggtca
  W
  ttctctccct TTTCTCCTTG ATGCCAACAA CCTTTGAGAC ATCTTGTGGC CTTTTTTGTC
  TTTGTTTGtt tatttgtttg agacagggtt tctctgtgta gccctggaag ttctgaaact
  cactctatag accaggctgg catcaaactc                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45071563	mCV23233962	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss145563659	ENSMUSSNP4760406	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
ss319997347	CHEV_1_138905056	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31796721					SNP	T	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136936217 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	1789 bp proximal
Rr419563	regulatory region 419563	1895 bp proximal