rs31798338 SNP Detail

Summary

• ID
  rs31798338
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:3876821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTTGAAGGA TTACTTTCTT GCTTTTTCTA TGATGTCACT
  TCTCTCCTTG TGTTGGAGAT TTCCCTGTAT TATCCTTTGA AGGGCTGGAT TTGTGGAAAG
  R
  TATTGTGCAA ATTTGGCTTT GCATGGAGTA CTGTGGCTTC TCCATCTATG ATAATTGAGA
  GTTTTGCTGG GTATAGTAGC CTGGGCTGGC ATTTGTGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45071274	mCV24041615	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss148461500	ENSMUSSNP2929906	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31798338					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:3876821 () rs orientation: forward

Symbol	Name	Function Class
Rr370728	regulatory region 370728	1079 bp upstream