rs31798635 SNP Detail

Summary

• ID
  rs31798635
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78230849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT CTATGGAATC TCACATACAC
  S
  TGTCCCCACC CTCCTGCTGT CTTCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39326975	mCV27573757	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss148183090	ENSMUSSNP1402654	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
ss325024506	CHEV_15_78177079	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31798635					SNP	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78230849 () rs orientation: forward

Symbol	Name	Function Class
Csf2rb	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	within coordinates
Mir7676-2	microRNA 7676-2	1950 bp upstream
Rr505249	regulatory region 505249	1739 bp proximal
Tssr131930	transcription start site region 131930	1738 bp downstream
Tssr131931	transcription start site region 131931	1154 bp downstream
Tssr131932	transcription start site region 131932	1418 bp upstream
Tssr131933	transcription start site region 131933	1502 bp upstream
Tssr131934	transcription start site region 131934	1566 bp upstream
Tssr131935	transcription start site region 131935	1631 bp upstream