rs31802017 SNP Detail

Summary

• ID
  rs31802017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:84338595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATC ACTGAGTTCT GATAGAGTTA
  R
  ATTGACTTCA GACGCCACAC TCCGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss46070229	mCV23881091	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss322297946	CHEV_7_91837897	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs31802017					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:84338595 () rs orientation: forward

Symbol	Name	Function Class
2610206C17Rik	RIKEN cDNA 2610206C17 gene	253 bp upstream
Cpgi19383	CpG island 19383	within coordinates
Rr400423	regulatory region 400423	427 bp upstream
Rr650631	regulatory region 650631	354 bp distal
Rr650632	regulatory region 650632	within coordinates
Rr650633	regulatory region 650633	368 bp proximal
Rr650634	regulatory region 650634	560 bp proximal
Tssr73444	transcription start site region 73444	407 bp downstream
Tssr73445	transcription start site region 73445	436 bp downstream
Tssr73446	transcription start site region 73446	458 bp downstream
Tssr73447	transcription start site region 73447	517 bp downstream
Tssr73448	transcription start site region 73448	547 bp downstream
Tssr73449	transcription start site region 73449	561 bp downstream
Tssr73450	transcription start site region 73450	593 bp downstream
Zfand6	zinc finger, AN1-type domain 6	within coordinates