rs31806595 SNP Detail

Summary

• ID
  rs31806595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19295440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCT CACCATCCCG TGGACTCAGG
  Y
  ACTTACCTTT CCCCCAATAC TATAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46071426	mCV25052525	ABI	CRAMUS_MOUSE	f	SNP	C				C	T
ss48163328	NES11822850	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C		T	C		C		C	C	C
ss148478839	ENSMUSSNP7140189	ENSEMBL	ENSEMBL_Sanger	f	SNP	C					T				C
ss322117454	CHEV_7_20146864	CHEVERUD	SCREENING_POP	f	SNP								C						T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs31806595					SNP	C	C	C	C	C	T	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48163328	NES11822850	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19295440 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18499	CpG island 18499	within coordinates
Ppp1r37	protein phosphatase 1, regulatory subunit 37	within coordinates
Rr643188	regulatory region 643188	971 bp proximal
Rr643189	regulatory region 643189	1551 bp proximal
Tssr70928	transcription start site region 70928	607 bp downstream
Tssr70929	transcription start site region 70929	653 bp downstream
Tssr70930	transcription start site region 70930	686 bp downstream
Tssr70931	transcription start site region 70931	862 bp downstream
Tssr70932	transcription start site region 70932	897 bp downstream