rs31808348 SNP Detail

Summary

• ID
  rs31808348
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44838743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTACCCAG ACAGACGGAT
  GGACTCGGCC CAGGGGAGAC AGTTGCCCCC AGAGAGGTGA GTGCTATGGG AAAAATGTCC
  ACACAAAACA GAGCCAGTAG AGGTCAGGGA TGCAGAGTGA GGAGGGAAGG GGCAGAGAGA
  TGCAGTGCTT AGCAGGGAGG AAAGCCAGCT GCAAAGAACC CATAGAGACG GGCAGAAGGG
  R
  CACCATGGGC TCAGGTACTA CCTGGGTGGT AGTTCTGTAC TCCTCCAAGG TCCGGGCCAG
  ACTCTCTGCA TGGCGGGTAC GCTGGGGTAC GGAACACAAA GCTACCTGAG GCAGGGCTCA
  GTTCCCCAAG ACATGAGGCT GCTGAAGGGG GGCTGGCTGA GCTGGGACAG CCTGCAGGCC
  ACACTGTAAC CTGGGAGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46071142	mCV27567944	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G	G
ss149131039	ENSMUSSNP6618785	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31808348					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44838743 () rs orientation: forward

Symbol	Name	Function Class
Gm31097	predicted gene, 31097	within coordinates
Kash5	KASH domain containing 5	within coordinates
Tssr72334	transcription start site region 72334	606 bp upstream
Tssr72335	transcription start site region 72335	235 bp downstream
Tssr72336	transcription start site region 72336	328 bp downstream
Tssr72337	transcription start site region 72337	352 bp downstream
Tssr72338	transcription start site region 72338	475 bp downstream