rs31810991 SNP Detail

Summary

• ID
  rs31810991
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43060530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGTACTGC TGACAGCCAG CCCCCTGCTA CACTGAGCTG
  GGTCCTAGAG GACCAAGTCC TTTCTTGGTC TAGCCCTGTG GGGTCGAGAA CCCTGGCACT
  R
  GAGCTGCCCT GGGTGAAAGC TGGGGACTCT GGACACTACA CTTGCCAAGC AGAGAATAGG
  CTGGGCTCCC AGCAACATAC CCTGGACCTC TCTGTGCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J
ss46071892	mCV22794648	ABI	CRAMUS_MOUSE	f	SNP		G	A				A		G
ss51478347	NES13970845	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A		G		A		G
ss149071803	ENSMUSSNP5635969	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						G
ss322196857	CHEV_7_50666476	CHEVERUD	SCREENING_POP	f	SNP											A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J
rs31810991					SNP	A	G	A	A	A	A	A	G	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51478347	NES13970845	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43060530 () rs orientation: forward

Symbol	Name	Function Class
Siglecg	sialic acid binding Ig-like lectin G	within coordinates
Tssr65991	transcription start site region 65991	1844 bp downstream
Tssr65992	transcription start site region 65992	1833 bp downstream
Tssr65993	transcription start site region 65993	1805 bp downstream
Tssr65994	transcription start site region 65994	1686 bp downstream