rs31810999 SNP Detail

Summary

• ID
  rs31810999
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148416805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCT GTAGGGGGCT CAGTGGTGTC
  Y
  CCCAACATGA ATCTCTACAT CCTGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45573909	mCV24213401	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss148002160	ENSMUSSNP1694818	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321419274	CHEV_4_147706457	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31810999					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148416805 () rs orientation: forward

Symbol	Name	Function Class
Gm68587	predicted gene, 68587	1102 bp upstream
Tssr40269	transcription start site region 40269	37 bp downstream
Tssr40270	transcription start site region 40270	1131 bp upstream