rs31811361 SNP Detail

Summary

• ID
  rs31811361
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43210776 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CATGC CTAGCTTCAC ATATGATTTT
  K
  ATTGTCTTGA GAACAAATTA TAGTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46071502	mCV25343372	ABI	CRAMUS_MOUSE	f	SNP	T		G	T
ss149076637	ENSMUSSNP6109060	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31811361					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43210776 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi18937	CpG island 18937	772 bp proximal
Gm44818	predicted gene 44818	within coordinates
Rr645990	regulatory region 645990	524 bp proximal
Rr645991	regulatory region 645991	915 bp proximal
Tssr66014	transcription start site region 66014	907 bp upstream
Tssr66015	transcription start site region 66015	939 bp upstream
Tssr66016	transcription start site region 66016	976 bp upstream
Zfp175	zinc finger protein 175	904 bp upstream