rs31812892 SNP Detail

Summary

• ID
  rs31812892
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153615311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAC CTTTAAGGCA GGATGAGGAG
  S
  GGAACTAAGC AGTTGCTTAG CCTCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45072582	mCV24630841	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss145749114	ENSMUSSNP861721	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31812892					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153615311 () rs orientation: forward

Symbol	Name	Function Class
C230024C17Rik	RIKEN cDNA C230024C17 gene	1736 bp upstream
Cpgi870	CpG island 870	598 bp proximal
Gm28513	predicted gene 28513	within coordinates
Rgs16	regulator of G-protein signaling 16	788 bp upstream
Rr420740	regulatory region 420740	1747 bp distal
Rr420741	regulatory region 420741	1353 bp distal
Rr420742	regulatory region 420742	7 bp proximal
Rr420743	regulatory region 420743	645 bp proximal
Tssr9477	transcription start site region 9477	779 bp upstream
Tssr9478	transcription start site region 9478	970 bp upstream